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    TNT

    Bytom@khubla.com May 19, 2014

    If you haven’t read this book, I highly recommend it.  I discovered it in high school and finally purchased my first copy at the now-gone Duthie Books in Kitsilano.  Without going into the details of the book, the author uses a simple Peano arithmetic called Typographical Number Theory  (TNT) to illustrate some of his points. An example…

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  • Java

    Parsing HTML

    Bytom@khubla.com May 3, 2014May 3, 2014

    I’ve been interested in HTML parsing for a while now.  There are a number of reasons to do this, such as: Validating that what claims to be HTML, is HTML Finding every style sheet and script in an HTML file Pretty-printing Syntax highlighting Linting Translating between markup languages, for example generating JSPs from PHP, or…

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  • Uncategorized

    More Bioinformatics

    Bytom@khubla.com May 2, 2014

    After FASTA, I got interested in gff3. The link to the grammar for this file is here: antlr/grammars-v4. You can read about gff3 here.

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  • Java

    Bioinformatics data

    Bytom@khubla.com April 28, 2014May 2, 2014

    I recently had a chance to learn a little about Bioinformatics, and ended up browsing the NIH’s database of genomes here.  Inside the genome data for any particular strain of a species, you’ll find various files with file extensions like “ffa”, “fna”, “ffn” and “frn”.  These are FASTA files. If you’d like an example, here’s…

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  • Java

    Reading Paradox Files

    Bytom@khubla.com April 20, 2014April 20, 2014

    Back in the day, Paradox was a pretty amazing database.  I recently had a reason to read some Paradox files for a friend, who had a client with a Paradox database.  They needed their data out of the database to insert into something more modern. Googling for the file format of a Paradox DB didn’t…

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  • FreeBSD

    FreeBSD Wandboard, new build with multicore

    Bytom@khubla.com April 13, 2014May 3, 2014

    The FreeBSD ARM team have completed the work to support multicore on ARM.  You can read the announcement here.  I’ve made a new build of FreeBSD ARM for Wandboard, which you can download here. The dmesg output is here, and here is the sysctl showing four cores [Kroot@wandboard:~ # sysctl -a | grep hw.ncpu hw.ncpu:…

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  • Java

    Pragmatch version 1.38 Released

    Bytom@khubla.com March 27, 2014

    Pragmatach version 1.38 has been released Here are the notable changes: Numerous bugs that were identified by Findbugs have been resolved. Upgraded from Antlr3 to Antlr4 Upgraded to scannotation 1.03 Added url_for API to make generation of urls in templates simpler  

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  • FreeBSD

    Bootstrapping pkgng on FreeBSD ARM

    Bytom@khubla.com March 12, 2014

    There is no official pkgng repo for FreeBSD-arm, yet.  There is an unofficial one, here, however in order to use it, you have to have pkgng installed.  As far as I can tell, the only way to install pkgng on ARM is to builds and install from source. On the platform I’m using, Wandboard, the…

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  • FreeBSD

    Building my own wireless point

    Bytom@khubla.com March 11, 2014March 12, 2014

    I got interested in building my own wireless point after seeing some of the wireless firmware issues like this.  Besides, I’ve always been interested in embedded devices and FreeBSD. So, the first step was a device.  I chose to use a Wandboard.  I’m a committer to Crochet-FreeBSD, so I built out the device support for…

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  • Pragmatach

    Pragmatach-1.32 Released

    Bytom@khubla.com February 24, 2014

    The latest release of the Pragmatach Framework is version 1.32.  Changes in this release include: Bug fix in JMX registration.  Web contexts can now be reloaded by the container and the JMX beans are gracefully unregistered and re-registered Addition of the @Startup and @Shutdown annotations to allow methods to be run at container shutdown and…

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