A Java TELNET server

I recently had a chance to learn a little about Bioinformatics, and ended up browsing the NIH’s database of genomes here.  Inside the genome data for any particular strain of a species, you’ll find various files with file extensions like “ffa”, “fna”, “ffn” and “frn”.  These are FASTA files. If you’d like an example, here’s…

A complete list of my ANTLR grammars HTML Redcode gff3 6502 Assembler fasta BASIC Creole Logo brainfuck

I’ve tried a couple different mp3 taggers to tag my mp3 library, however, most seem to have trouble with large mp3 libraries.  So, after doing some reading about AcoustID and MusicBrainz I decided to quickly code up my own tagger, MusicBrainzTagger. MusicBrainzTagger is a command-line application which recurses a directory of mp3 files and tags…

I’ve been interested in HTML parsing for a while now.  There are a number of reasons to do this, such as: Validating that what claims to be HTML, is HTML Finding every style sheet and script in an HTML file Pretty-printing Syntax highlighting Linting Translating between markup languages, for example generating JSPs from PHP, or…

I recently got a call from a friend who has a library of thousands of PDF documents. He wanted to know there was a such thing as a personal search engine that could index his library of documents, and allow full text search inside of them. I have a giant document library too, including PDF…

I’ve been interested in RIAK for a while, and ORM’s are nothing short of fascinating. I decided to try writing an ORM for Riak, and the results are here: https://github.com/teverett/cbean My ORM is not an ORM of course, because RIAK is not relational. However it is ORM-like; I can store POJO’s and retrieve them. The…