Ebean-DAO

When writing custom servlets, it can be quite useful to unit test them.  In my case, I used a combination of testng and mockito.  The basic idea is simple; mock a HttpServletRequest, and a HttpServletResponse and pass them to the custom servlet.  There is a bit more too it, so here’s an example. final HttpServletRequest…

I recently had a chance to learn a little about Bioinformatics, and ended up browsing the NIH’s database of genomes here.  Inside the genome data for any particular strain of a species, you’ll find various files with file extensions like “ffa”, “fna”, “ffn” and “frn”.  These are FASTA files. If you’d like an example, here’s…

I’ve been interested in RIAK for a while, and ORM’s are nothing short of fascinating. I decided to try writing an ORM for Riak, and the results are here: https://github.com/teverett/cbean My ORM is not an ORM of course, because RIAK is not relational. However it is ORM-like; I can store POJO’s and retrieve them. The…

I recently got a call from a friend who has a library of thousands of PDF documents. He wanted to know there was a such thing as a personal search engine that could index his library of documents, and allow full text search inside of them. I have a giant document library too, including PDF…

I’ve recently been quite interested in Graph languages, not for Graph Databases, but for representing information, in code that is essentially “things” and “relationships”. For example, one perspective on Organizations is that they are simply representable as people, systems and the information that flows between them. Those three building blocks are, in theory, enough to…

Commons Math is an Apache library which includes a variety of mathematical tools, including 1st and 2nd-order ODE solvers.  In order to familiarize myself with the ODE solvers, I wrote a simple program to solve an RC charging circuit. The circuit has these parameters: R (ohms), the resistance of the resistor C (farads), the capacitance…