More Bioinformatics
After FASTA, I got interested in gff3. The link to the grammar for this file is here: antlr/grammars-v4. You can read about gff3 here.
After FASTA, I got interested in gff3. The link to the grammar for this file is here: antlr/grammars-v4. You can read about gff3 here.
I’ve bee hacking away trying to set up Crochet-BSD to build boot images for Wandboard. Wandboard uses Cortex A9 processor, so it’s ARM. The linux distros for it use U-Boot, so that seemed like a likely place to start for FreeBSD. Looking at the Wandboard Wiki, there is an article on U-Boot which explains how…
In general, I install QEMU on my Macbook using MacPorts. However I recently had a need to get the tip of the QEMU development tree. Getting the QEMU source tree is trivial: git clone git://git.qemu-project.org/qemu.git I needed an updated version of dtc: git submodule update –init dtc The build instructions from the README are: mkdir…
I’ve recently become interested in how the i386 boot loader works. There is an excellent example of a boot loader here, and another here. Some simple protected-mode code which implements a kernel capable of writing a line of text, is here. FemtoOS, is the culmination of combining code from all those, and building a simple…
There are new release builds for some of the more widely used khubla.com libraries, resulting for patching for the log4j vulnerability. They are: ParadoxReader <groupId>com.khubla.pdxreader</groupId><artifactId>pdxreader</artifactId><version>1.6</version><packaging>jar</packaging> OLMReader <groupId>com.khubla.olmreader</groupId><artifactId>olmreader</artifactId><version>1.9.0</version><packaging>jar</packaging> JVMBasic kPascal
Home automation is coming into the mainstream a with recent offerings from the big tech companies, and I’m interested in it too. I’ve had a number of home automation controllers, most recently an H3 Pro SEL from HomeSeer. I’ve also become quite interested recently in DevOps monitoring, using InfluxDB, and Grafana. Sensu, Telegraf and Prometheus…
After all, now that we have wireless thermostats, door locks, outlets, dimmers, alarms, garage doors, and motion sensors, it only makes sense to publish events onto a Service Bus. In my case I used Mosquitto in a FreeBSD jail as my broker. My home controller is a HomeSeer. There are MQTT plugins available, but I…